To set up the environment for MMTSB, use the 'module load MMTSB' command as in the example below.
biowulf% module load mmtsb
The MMTSB Tool Set benefits from the availability of other software packages, in particular CHARMM, Amber, NAMD, Modeller, DSSP, SCWRL, NCBI-BLAST, PSIPRED. Note that the Tool Set now works with installation of either scwrl3 or scwrl2.5.
Please contact email@example.com if you are interested in using MMTSB with SCWRL or MODELLER.
The following environment variables are related to these packages and should be set accordingly. The values below are suggestions: the version of the program often depends on the network (gige, ipath, ib) that you want to use.
|CHARMMEXEC||set to the specific executable you want to use.|
Documentation at the MMTSB website.